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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term ORC6:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000091651	ORC6	0	0	6	ENSG00000091651	ENST00000563599	ENSP00000454299	origin recognition complex, subunit 6 [Source:HGNC Symbol;Acc:17151]	16	46723555	46732306	1	q11.2	46723555	46731423	ORC6	ORC6-004	HGNC Symbol	HGNC transcript name	9	44.16	protein_coding	nonsense_mediated_decay	ensembl_hava	havana	KNOWN	KNOWN	23594	17151	ORC6		27514

MSeqDR Master Exome Data Set M1: 114 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	16	46723561	C	T	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	NA	-	-	lod=29:329	-	-	-	het	2
2	16	46723561	C	T	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	NA	-	-	lod=29:329	-	-	-	het	2
3	16	46723571	G	A	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	het	18
4	16	46723571	G	A	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	hom	1
5	16	46723571	G	A	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	het	18
6	16	46723571	G	A	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	hom	1
7	16	46723571	G	A	ENST00000569239	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.1G>A	p.V1I	non-syn	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	het	18
8	16	46723571	G	A	ENST00000569239	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.1G>A	p.V1I	non-syn	rs144065502	0.0051	A=33/G=8397;A=3/G=4307;A=36/G=12704	-	-	-	-	hom	1
9	16	46723597	G	-T	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
10	16	46723597	G	-T	ENST00000563306	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.5_5del	p.V2NA	non-syn	NA	-	-	-	-	-	-	het	1
11	16	46723597	G	-T	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
12	16	46723597	G	-T	ENST00000569239	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.28_28del	p.F10NA	non-syn	NA	-	-	-	-	-	-	het	1
13	16	46723598	T	C	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	het	401
14	16	46723598	T	C	ENST00000219097	ENSG00000091651	46723555	46732306	ENSP00000219097	ORC6	1	ORC6_HUMAN	-	-	5'_UTR	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	hom	195
15	16	46723598	T	C	ENST00000563306	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.5T>C	p.V2A	non-syn	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	het	401
16	16	46723598	T	C	ENST00000563306	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.5T>C	p.V2A	non-syn	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	hom	195
17	16	46723598	T	C	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	het	401
18	16	46723598	T	C	ENST00000563599	ENSG00000091651	46723555	46732306	ENSP00000454299	ORC6	1	-	-	-	5'_UTR	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	hom	195
19	16	46723598	T	C	ENST00000569239	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.28T>C	p.F10L	non-syn	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	het	401
20	16	46723598	T	C	ENST00000569239	ENSG00000091651	46723555	46732306	-	ORC6	1	-	c.28T>C	p.F10L	non-syn	rs33994299	0.4298	C=3932/T=4614;C=476/T=3896;C=4408/T=8510	-	-	-	-	hom	195

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding ORC6 16:46723555..46732306 region Gbrowse